- Primary
- Libona counted over 20 Elementary School that caters the youth in the different barangays in the municipality.
- Secondary
- Libona National High School (Crossing)
- Kinawe National High School (Kinawe)
- Hossana Academy of Bukidnon Inc. (Gango)
- Tertiary
- Bukidnon State University – Libona Extension Studies Center (Poblacion)